Name: Caldicoprobacter Yokoyama et al. 2010

Category: Genus

Proposed as: gen. nov.

Etymology: Cal.di.co.pro.bac’ter. L. masc. adj. caldus, hot; Gr. fem. n. kopros, dung; N.L. masc. n. bacter, rod; N.L. masc. n. Caldicoprobacter, a rod from dung growing at elevated temperatures

Gender, pronunciation: masculine (stem: Caldicoprobacter-), kal-di-ko-pro-BAK-ter

Type species: Caldicoprobacter oshimai Yokoyama et al. 2010

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: Yokoyama H, Wagner ID, Wiegel J. Caldicoprobacter oshimai gen. nov., sp. nov., an anaerobic, xylanolytic, extremely thermophilic bacterium isolated from sheep faeces, and proposal of Caldicoprobacteraceae fam. nov. Int J Syst Evol Microbiol 2010; 60:67-71.

IJSEM list: Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 60, part 1 of the IJSEM. Int J Syst Evol Microbiol 2010; 60:719-720.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

Risk group: 1

• Emendations:
  • Bouanane-Darenfed et al. 2011 Bouanane-Darenfed A, Fardeau ML, Gregoire P, Joseph M, Kebbouche-Gana S, Benayad T, Hacene H, Cayol JL, Ollivier B. Caldicoprobacter algeriensis sp. nov. a new thermophilic anaerobic, xylanolytic bacterium isolated from an Algerian hot spring. Curr Microbiol 2011; 62:826-832. Euzeby JP. List of changes in taxonomic opinion no. 16. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2012; 62:1448-1449.
    Notes:
    • ⊕ Emendation accompanied by the proposal of 1 new species in the genus.

• Notes:
  • 🥇 Nomenclatural type of the family Caldicoprobacteraceae Yokoyama et al. 2010. Publication: Yokoyama H, Wagner ID, Wiegel J. Caldicoprobacter oshimai gen. nov., sp. nov., an anaerobic, xylanolytic, extremely thermophilic bacterium isolated from sheep faeces, and proposal of Caldicoprobacteraceae fam. nov. Int J Syst Evol Microbiol 2010; 60:67-71.
  • 🥇 Nomenclatural type of the order Caldicoprobacterales Chuvochina et al. 2024. Publication: Chuvochina M, Mussig AJ, Chaumeil PA, Skarshewski A, Rinke C, Parks DH, Hugenholtz P. Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes. FEMS Microbiol Lett 2023; 0:0.
  • 🧕 Chuvochina et al. (2023) assigned this genus to the order Caldicoprobacterales Chuvochina et al. 2024. Publication: Chuvochina M, Mussig AJ, Chaumeil PA, Skarshewski A, Rinke C, Parks DH, Hugenholtz P. Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes. FEMS Microbiol Lett 2023; 0:0.
  • 🙄 This taxon name is occasionally misprinted (or affected by an OCR error) in some sources as: "Calicoprobacter"; "Dicoprobacter".
  • 💁 Taxonomists who have recently focused on this group are the corresponding authors of Bouanane-Darenfed et al. (2015). Editors in search of reviewers are advised to consider additional criteria such as whether a taxon is covered by one of the ICSP subcommittees.
  • 🎰 The BRCs most frequently used for deposits in this group are: DSM: 4; JCM: 3; ATCC: 1.
  • 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Animal classification RG: 1 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No - Containment level: Containment Level 1". — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.

Subdivision:

Number of child taxa with a validly published and correct name: 3
Number of child taxa with a validly published name, including synonyms: 4
Total number of child taxa: 4

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    Caldicoprobacter algeriensis Bouanane-Darenfed et al. 2012	validly published under the ICNP	correct name
    Caldicoprobacter faecalis (Winter et al. 1988) Bouanane-Darenfed et al. 2015	validly published under the ICNP	correct name
    Caldicoprobacter guelmensis Bouanane-Darenfed et al. 2013	validly published under the ICNP	correct name
    Caldicoprobacter oshimai Yokoyama et al. 2010	validly published under the ICNP	synonym

Parent taxon: Caldicoprobacteraceae Yokoyama et al. 2010

Assigned by: Yokoyama H, Wagner ID, Wiegel J. Caldicoprobacter oshimai gen. nov., sp. nov., an anaerobic, xylanolytic, extremely thermophilic bacterium isolated from sheep faeces, and proposal of Caldicoprobacteraceae fam. nov. Int J Syst Evol Microbiol 2010; 60:67-71.

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Record number: 517937