Name: Coprobacter Shkoporov et al. 2013

Category: Genus

Proposed as: gen. nov.

Etymology: Co.pro.bac’ter. Gr. fem. n. kopros, excrement; N.L. masc. n. bacter, rod; N.L. masc. n. Coprobacter, a rod isolated from excrements

Gender: masculine (stem: Coprobacter-)

Type species: Coprobacter fastidiosus Shkoporov et al. 2013

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: Shkoporov AN, Khokhlova EV, Chaplin AV, Kafarskaia LI, Nikolin AA, Polyakov VY, Shcherbakova VA, Chernaia ZA, Efimov BA. Coprobacter fastidiosus gen. nov., sp. nov., a novel member of the family Porphyromonadaceae isolated from infant faeces. Int J Syst Evol Microbiol 2013; 63:4181-4188.

IJSEM list: Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 63, part 11 of the IJSEM. Int J Syst Evol Microbiol 2014; 64:313-315.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

• Synonyms:

  • Name	Kind
    "Gabonia" Mourembou et al. 2016	heterotypic synonym, not validly published

• Emendations:
  • Sakamoto et al. 2021 Sakamoto M, Ikeyama N, Toyoda A, Murakami T, Mori H, Morohoshi S, Kunihiro T, Iino T, Ohkuma M. Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces. Microbiol Immunol 2021; 65:245-256. Oren A, Garrity GM. List of changes in taxonomic opinion no. 35. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2022; 72:5164.

• Notes:
  • 🥇 Nomenclatural type of the family Coprobacteraceae Chuvochina et al. 2024. Publication: Chuvochina M, Mussig AJ, Chaumeil PA, Skarshewski A, Rinke C, Parks DH, Hugenholtz P. Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes. FEMS Microbiol Lett 2023; 0:0.
  • 🧕 Chuvochina et al. (2023) assigned this genus to the family Coprobacteraceae Chuvochina et al. 2024. Publication: Chuvochina M, Mussig AJ, Chaumeil PA, Skarshewski A, Rinke C, Parks DH, Hugenholtz P. Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes. FEMS Microbiol Lett 2023; 0:0.
  • 🧕 Lagkouvardos et al. (2019) assigned this genus to the family Muribaculaceae Lagkouvardos et al. 2019. Publication: Lagkouvardos I, Lesker TR, Hitch TCA, Galvez EJC, Smit N, Neuhaus K, Wang J, Baines JF, Abt B, Stecher B, et al. Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family. Microbiome 2019; 7:28.
  • 💁 Taxonomists who have recently focused on this group are the corresponding authors of Shkoporov et al. (2015). Editors in search of reviewers are advised to consider additional criteria such as whether a taxon is covered by one of the ICSP subcommittees.
  • 🎰 The BRCs most frequently used for deposits in this group are: DSM: 3; VKM: 2; NCTC: 1; JCM: 1.

Subdivision:

Number of child taxa with a validly published and correct name: 3
Number of child taxa with a validly published name, including synonyms: 3
Total number of child taxa: 3

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    Coprobacter fastidiosus Shkoporov et al. 2013	validly published under the ICNP	correct name
    Coprobacter secundus Shkoporov et al. 2015	validly published under the ICNP	correct name
    Coprobacter tertius Teng et al. 2023	validly published under the ICNP	correct name

Parent taxon: Barnesiellaceae García-López et al. 2020

Assigned by: Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.

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Record number: 518448