Name: Gordonibacter Würdemann et al. 2009

Category: Genus

Proposed as: gen. nov.

Etymology: Gor.do.ni.bac.ter. N.L. masc. n. Gordon, Gordon, named after Jeffrey I. Gordon, MD, the Dr Robert J. Glaser Distinguished University Professor and Director of the Center for Genome Sciences at Washington University School of Medicine, St. Louis, MO, USA (personal name considered as a Latin word); N.L. masc. n. bacter, a rod; N.L. masc. n. Gordonibacter, a rod named after Jeffrey I. Gordon

Gender: masculine (stem: Gordonibacter-)

Type species: Gordonibacter pamelaeae Würdemann et al. 2009

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: Wurdemann D, Tindall BJ, Pukall R, Lunsdorf H, Strompl C, Namuth T, Nahrstedt H, Wos-Oxley M, Ott S, Schreiber S, et al. Gordonibacter pamelaeae gen. nov., sp. nov., a new member of the Coriobacteriaceae isolated from a patient with Crohn's disease, and reclassification of Eggerthella hongkongensis Lau et al. 2006 as Paraeggerthella hongkongensis gen. nov., comb. nov. Int J Syst Evol Microbiol 2009; 59:1405-1415.

IJSEM list: Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 59, part 6 of the IJSEM. Int J Syst Evol Microbiol 2009; 59:2131-2132.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

• Emendations:
  • Danylec et al. 2019 Danylec N, Stoll DA, Huch M. Gordonibacter faecihominis is a later heterotypic synonym of Gordonibacter urolithinfaciens. Int J Syst Evol Microbiol 2019; 69:2527-2532. Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 69, part 8 of the IJSEM. Int J Syst Evol Microbiol 2019; 69:3315-3317.

• Notes:
  • Yilmaz et al. (2014) assigned this genus to the family Coriobacteriaceae Stackebrandt et al. 1997. Publication: Yilmaz P, Parfrey LW, Yarza P, Gerken J, Pruesse E, Quast C, Schweer T, Peplies J, Ludwig W, Glöckner FO. The SILVA and “all-species living tree project (LTP)” taxonomic frameworks. Nucleic Acids Research 2014; 42(D1):D643-D648.
  • The BRCs most frequently used for deposits in this group are: CCUG: 2; DSM: 2; JCM: 2; KCTC: 1.

Subdivision:

Number of child taxa with a validly published and correct name: 2
Number of child taxa with a validly published name, including synonyms: 3
Total number of child taxa: 5

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    "Candidatus Gordonibacter avicola" Gilroy et al. 2021	not validly published
    Gordonibacter faecihominis Jin et al. 2015	validly published under the ICNP	synonym
    "Gordonibacter massiliensis" Traore et al. 2017	not validly published
    Gordonibacter pamelaeae Würdemann et al. 2009	validly published under the ICNP	correct name
    Gordonibacter urolithinfaciens Selma et al. 2014	validly published under the ICNP	correct name

Parent taxon: Eggerthellaceae Gupta et al. 2013

Assigned by: Gupta RS, Chen WJ, Adeolu M, Chai Y. Molecular signatures for the class Coriobacteriia and its different clades; proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov. Int J Syst Evol Microbiol 2013; 63:3379-3397.

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Record number: 517871