Name: Pannonibacter Borsodi et al. 2003

Category: Genus

Proposed as: gen. nov.

Etymology: Pan.no.ni.bac’ter. L. fem. n. Pannonia, Roman province in what is now Hungary, also referring to ‘Pannon lakes’, shallow soda lakes found in the western part of Hungary; N.L. masc. n. bacter, rod; from Gr. neut. n. baktron, rod; N.L. masc. n. Pannonibacter, rod-shaped microbe from a Hungarian soda lake

Gender, pronunciation: masculine (stem: Pannonibacter-), pan-no-ni-BAK-ter

Type species: Pannonibacter phragmitetus Borsodi et al. 2003

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: Borsodi AK, Micsinai A, Kovacs G, Toth E, Schumann P, Kovacs AL, Boddi B, Marialigeti K. Pannonibacter phragmitetus gen. nov., sp. nov., a novel alkalitolerant bacterium isolated from decomposing reed rhizomes in a Hungarian soda lake. Int J Syst Evol Microbiol 2003; 53:555-561.

IJSEM list: Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 53, part 2 of the IJSEM. Int J Syst Evol Microbiol 2003; 53:939-940.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

Risk group: 1

• Emendations:
  • Biebl et al. 2007 Biebl H, Pukall R, Lunsdorf H, Schulz S, Allgaier M, Tindall BJ, Wagner-Dobler I. Description of Labrenzia alexandrii gen. nov., sp. nov., a novel alphaproteobacterium containing bacteriochlorophyll a, and a proposal for reclassification of Stappia aggregata as Labrenzia aggregata comb. nov., of Stappia marina as Labrenzia marina comb. nov. and of Stappia alba as Labrenzia alba comb. nov., and emended descriptions of the genera Pannonibacter, Stappia and Roseibium, and of the species Roseibium denhamense and Roseibium hamelinense. Int J Syst Evol Microbiol 2007; 57:1095-1107. Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 57, part 5 of the IJSEM. Int J Syst Evol Microbiol 2007; 57:1675-1676.

• Notes:
  • 🧕 Brenner et al. (2005) assigned this genus to the family Rhodobacteraceae Garrity et al. 2006. Publication: Garrity GM, Bell JA, Lilburn T. Family I. Rhodobacteraceae fam. nov. In: Brenner DJ, Krieg NR, Staley JT, Garrity GM (eds), Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer, New York, 2005, p. 161.
  • 🧬 The phylogenomic assignment score of this taxon is 0.01962 (N = 31).
  • 🎰 The BRCs most frequently used for deposits in this group are: DSM: 3; LMG: 2; JCM: 2; KCTC: 2; GDMCC: 1; CGMCC: 1; NCAIM: 1.
  • 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Animal classification RG: 1 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No - Containment level: Containment Level 1". — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.

Subdivision:

Number of child taxa with a validly published and correct name: 4
Number of child taxa with a validly published name, including synonyms: 4
Total number of child taxa: 6

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    "Pannonibacter anstelovis" Castellana et al. 2024	not validly published	preferred name
    Pannonibacter carbonis Xi et al. 2018	validly published under the ICNP	correct name
    Pannonibacter indica Bandyopadhyay et al. 2013	inaccurate spelling	misspelling
    Pannonibacter indicus corrig. Bandyopadhyay et al. 2013	validly published under the ICNP	correct name
    Pannonibacter phragmitetus Borsodi et al. 2003	validly published under the ICNP	correct name
    Pannonibacter tanglangensis Wang et al. 2025	validly published under the ICNP	correct name

Parent taxon: Stappiaceae Hördt et al. 2020

Assigned by: Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.

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Record number: 516250