Name: Shinella An et al. 2006

Category: Genus

Proposed as: gen. nov.

Etymology: Shin.el’la. N.L. fem. dim. n. Shinella, named after Yong-Kook Shin, for his contributions to reclassification of the genus Zoogloea

Gender: feminine (stem: Shinell-)

Type species: Shinella granuli An et al. 2006

Conduct genome-based taxonomy of genus at TYGS

16S rRNA gene: Analyse FASTA

Valid publication: An DS, Im WT, Yang HC, Lee ST. Shinella granuli gen. nov., sp. nov., and proposal of the reclassification of Zoogloea ramigera ATCC 19623 as Shinella zoogloeoides sp. nov. Int J Syst Evol Microbiol 2006; 56:443-448.

IJSEM list: Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 56, part 2 of the IJSEM. Int J Syst Evol Microbiol 2006; 56:929-930.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

Risk group: 1

• Synonyms:

  • Name	Kind
    Crabtreella Xie and Yokota 2006	heterotypic synonym, validly published under the ICNP, illegitimate name

• Emendations:
  • Matsui et al. 2009 Matsui T, Shinzato N, Tamaki H, Muramatsu M, Hanada S. Shinella yambaruensis sp. nov., a 3-methyl-sulfolane-assimilating bacterium isolated from soil. Int J Syst Evol Microbiol 2009; 59:536-539. Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 59, part 3 of the IJSEM. Int J Syst Evol Microbiol 2009; 59:1259-1261.
    Notes:
    • ⊕ Emendation accompanied by the proposal of 1 new species in the genus.

• Notes:
  • 🙄 This taxon name is occasionally misprinted (or affected by an OCR error) in some sources as: "Shinilla".
  • 🧔 This taxon was discussed in a meeting of a Taxonomic Subcommittee of the ICSP. Publication: Lindstrom K, Young JP. International committee on systematics of prokaryotes; subcommittee on the taxonomy of agrobacterium and rhizobium: minutes of the meetings, 31 August 2008, Gent, Belgium. Int J Syst Evol Microbiol 2009; 59:921-922.
  • 🧔 This taxon was discussed in a meeting of a Taxonomic Subcommittee of the ICSP. Publication: Mousavi SA, Young JPW. International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Rhizobia and Agrobacteria. Minutes of the closed annual meeting: videoconference on 11 October 2022 followed by online discussion until 31 December 2022. Int J Syst Evol Microbiol 2023; 73:5856.
  • 🧔 This taxon was discussed in a meeting of a Taxonomic Subcommittee of the ICSP. Publication: Mousavi SA, Young JPW. International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Rhizobia and Agrobacteria: Minutes of the closed annual meeting, videoconference on 2 October 2023, followed by online discussion until 31 December 2023. Int J Syst Evol Microbiol 2024; 74:6276.
  • 😢 The terminology used by the authors is in line with many other taxonomic studies and does not negatively affect their main results; some improvements may nevertheless be possible. Contrasting the term "chemotaxonomic" with "phenotypic" is not recommended. Using the term "phylogenetic data" (or equivalent) for sequence data is not advocated. See the LPSN phylogeny page for details. Publication: Göker M. What can genome analysis offer for bacteria? In: Bridge P, Smith D, Stackebrandt E (eds), Trends in the systematics of bacteria and fungi, CAB International, Wallingford, 2021, p. 255-281.
  • 🧬 The phylogenomic assignment score of this taxon is 0.05757 (N = 9).
  • 🎰 The BRCs most frequently used for deposits in this group are: DSM: 7; KCTC: 5; JCM: 5; LMG: 3; ATCC: 2; NBRC: 2; MCCC: 1; CCUG: 1.
  • 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Animal classification RG: 1 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No - Containment level: Containment Level 1".

Subdivision:

Number of child taxa with a validly published and correct name: 10
Number of child taxa with a validly published name, including synonyms: 10
Total number of child taxa: 13

• Child taxa:

  • Name	Nomenclatural status	Taxonomic status
    "Shinella albus" Li et al. 2016	not validly published	preferred name (not correct name)
    Shinella curvata Subhash and Lee 2016	validly published under the ICNP	correct name
    Shinella daejeonensis Lee et al. 2011	validly published under the ICNP	correct name
    Shinella fusca Vaz-Moreira et al. 2010	validly published under the ICNP	correct name
    Shinella granuli An et al. 2006	validly published under the ICNP	correct name
    Shinella kummerowiae Lin et al. 2008	validly published under the ICNP	correct name
    Shinella lacus Gong et al. 2022	validly published under the ICNP	correct name
    "Shinella oryzae" Gao et al. 2022	not validly published	preferred name (not correct name)
    Shinella pollutisoli Mu et al. 2018	validly published under the ICNP	correct name
    Shinella sedimenti Chen et al. 2023	validly published under the ICNP	correct name
    "Shinella sumterensis" Arya et al. 2022	not validly published	preferred name (not correct name)
    Shinella yambaruensis Matsui et al. 2009	validly published under the ICNP	correct name
    Shinella zoogloeoides An et al. 2006	validly published under the ICNP	correct name

Parent taxon: Rhizobiaceae Conn 1938 (Approved Lists 1980)

Assigned by: An DS, Im WT, Yang HC, Lee ST. Shinella granuli gen. nov., sp. nov., and proposal of the reclassification of Zoogloea ramigera ATCC 19623 as Shinella zoogloeoides sp. nov. Int J Syst Evol Microbiol 2006; 56:443-448.

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Record number: 516594