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Species Sphingobium herbicidovorans
Name: Sphingobium herbicidovorans (Zipper et al. 1997) Takeuchi et al. 2001
Basonym: Sphingomonas herbicidovorans Zipper et al. 1997
Etymology: her.bi.ci.do.vo.rans. L. fem. n. herba, an herb; L. masc. n. suff. -cida, murderer, killer; from L. v. caedo, to cut or kill; L. pres. part. vorans, eating, devouring; N.L. neut. part. adj. herbicidovorans, herbicide-devouring, referring to its ability to utilize herbicides as a sole source of carbon and energy
Type strain: ATCC 700291; CIP 106705; DSM 11019; IFO 16415; LMG 18315; MH; NBRC 16415
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
AB022428
Analyse
FASTA
Valid publication:
Takeuchi M, Hamana K, Hiraishi A. Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int J Syst Evol Microbiol 2001; 51:1405-1417. 
IJSEM list:
Anonymous. Notification list. Notification that new names and new combinations have appeared in volume 51, part 4 of the IJSEM. Int J Syst Evol Microbiol 2001; 51:1621-1623.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Synonyms:
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Name Kind Sphingomonas herbicidovorans Zipper et al. 1997 homotypic synonym, validly published under the ICNP
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Emendations:
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
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Notes:
- 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No". — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1. — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.
- 🎓 Name mentioned 12 times in PubMed until 2024-03-27.
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🧍 According to Rules 27(3) and 30, this name is not validly published because the effective publication makes no reference to the deposit of the type strain in any publicly accessible service collection, but deposits in at least two recognized culture collections in different countries are documented. According to the Judicial Opinion 81, Sphingobium herbicidovorans (Zipper et al. 1997) Takeuchi et al. 2001 is to be considered to be validly published.
Publication:
Euzeby JP, Tindall BJ. Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an opinion. Int J Syst Evol Microbiol 2004; 54:293-301.
Parent taxon: Sphingobium Takeuchi et al. 2001
Assigned by:
Takeuchi M, Hamana K, Hiraishi A. Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int J Syst Evol Microbiol 2001; 51:1405-1417.
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Record number: 780987
This LPSN page was printed on 2024-11-29 12:58:18