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Species Chryseobacterium scophthalmum
Name: Chryseobacterium scophthalmum (Mudarris et al. 1994) Vandamme et al. 1994
Basonym: Flavobacterium scophthalmum Mudarris et al. 1994
Etymology: scoph.thal.mum. N.L. masc. n. Scophthalmus, scientific name of a genus that encompasses the turbot; N.L. neut. adj. scophthalmum, pertaining to turbot (sic)
Type strain: ATCC 700039; CCM 4109; CCUG 33454; CIP 104199; DSM 16779; LMG 13028; MM1
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
AJ271009
Analyse
FASTA
Valid publication:
Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int. J. Syst. Bacteriol. 1994; 44:827-831. 
IJSEM list:
Anonymous. Notification list. Notification that new names and new combinations have appeared in volume 44, part 4 of the IJSB. Int J Syst Bacteriol 1995; 45:199-200.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Synonyms:
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Name Kind Flavobacterium scophthalmum Mudarris et al. 1994 homotypic synonym, validly published under the ICNP
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Emendations:
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García-López et al. 2019
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
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Heidler von Heilborn et al. 2022
Heidler von Heilborn D, Nover LL, Weber M, Holzl G, Gisch N, Waldhans C, Mittler M, Kreyenschmidt J, Woehle C, Huttel B, et al. Polar lipid characterization and description of Chryseobacterium capnotolerans sp. nov., isolated from high CO2-containing atmosphere and emended descriptions of the genus Chryseobacterium, and the species C. balustinum, C. daecheongense, C. formosense, C. gleum, C. indologenes, C. joostei, C. scophthalmum and C. ureilyticum. Int J Syst Evol Microbiol 2022; 72:5372.
Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 72, part 5 of the IJSEM. Int J Syst Evol Microbiol 2022; 72:5476.
Notes:- 😢 The terminology used by the authors is in line with many other taxonomic studies and does not negatively affect their main results; some improvements may nevertheless be possible. Contrasting the term "chemotaxonomic" with "phenotypic" is not recommended. Using the term "phylogenetic data" (or equivalent) for sequence data is not advocated. See the LPSN phylogeny page for details.
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García-López et al. 2019
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
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Notes:
- 😷 The risk group for Belgium has been imported on 2024-02-05. The full classification is: risk group = 1, note = "animal pathogen - biological class of risk animal: 2". — The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 2, note = "PV". — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 2, note = "t". — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.
- 🎓 Name mentioned 12 times in PubMed until 2024-03-27.
Parent taxon: Chryseobacterium Vandamme et al. 1994
Assigned by:
Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int. J. Syst. Bacteriol. 1994; 44:827-831.
Linking: To permanently link to this page, use https://lpsn.dsmz.de/species/chryseobacterium-scophthalmumLink copied to clipboard
Record number: 774719
This LPSN page was printed on 2025-04-30 23:08:59