Name: Empedobacter brevis (Holmes and Owen 1982 ex Lustig 1890) Vandamme et al. 1994

Category: Species

Proposed as: comb. nov.

Basonym: Flavobacterium breve (ex Lustig 1890) Holmes and Owen 1982

Etymology: bre’vis. L. masc. adj. brevis, short

Pronunciation (Latin), gender: … BRE-wis, masculine

Type strain: LMG 4011; NCTC 11099

Conduct genome-based taxonomy at

16S rRNA gene: AB517707 Analyse FASTA

Valid publication: Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int. J. Syst. Bacteriol. 1994; 44:827-831. 🇧🇪

IJSEM list: Anonymous. Notification list. Notification that new names and new combinations have appeared in volume 44, part 4 of the IJSB. Int J Syst Bacteriol 1995; 45:199-200.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name (and explicitly recommended for medical use)

Risk group: 2

• Synonyms:

  • Name	Kind
    "Flavobacterium brevis" Bergey et al. 1923	homotypic synonym, not validly published
    Flavobacterium breve (ex Lustig 1890) Holmes and Owen 1982	homotypic synonym, validly published under the ICNP

• Emendations:
  • Zhang et al. 2014 Zhang RG, Tan X, Zhao XM, Deng J, Lv J. Moheibacter sediminis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from sediment, and emended descriptions of Empedobacter brevis, Wautersiella falsenii and Weeksella virosa. Int J Syst Evol Microbiol 2014; 64:1481-1487. 🇨🇳 Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 64, part 5 of the IJSEM. Int J Syst Evol Microbiol 2014; 64:2509-2511.
    Notes:
    • 😢 The terminology used by the authors is in line with many other taxonomic studies and does not negatively affect their main results; some improvements may nevertheless be possible. Using the term "phylogenetic data" (or equivalent) for sequence data is not advocated. Whether taxa can have "members" is debatable. See the LPSN phylogeny page for details.
  • Hahnke et al. 2016 Hahnke RL, Meier-Kolthoff JP, Garcia-Lopez M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Goker M. Genome-Based Taxonomic Classification of Bacteroidetes. Front Microbiol 2016; 7:2003. 🇩🇪 Oren A, Garrity GM. List of changes in taxonomic opinion no. 26. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2017; 67:2081-2086.
    Notes:
    • 🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.

• Notes:
  • 🥇 Nomenclatural type of the genus Empedobacter (ex Prévot 1961) Vandamme et al. 1994. Publication: Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int. J. Syst. Bacteriol. 1994; 44:827-831. 🇧🇪
  • 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Animal classification RG: 1 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No - Containment level: Containment Level 1". — The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 2. — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 2, note = "ht". — The risk group for Taiwan has been imported on 2024-11-03. The full classification is: risk group = 2, note = "P650 = v". — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.
  • 🎓 Name mentioned 33 times in PubMed until 2025-06-04.
  • 🙆 This name is on the List of Recommended Names for bacteria of medical importance (LoRN) as the name to be applied to this species. The name is on LoRN because of the recorded risk group of the species itself.
  • 🧍 According to Bartlett et al. (2022), this species is an established human pathogen. Publication: Bartlett A, Padfield D, Lear L, Bendall R, Vos M. A comprehensive list of bacterial pathogens infecting humans. Microbiology (Reading) 2022; 168:0. 🇬🇧

Parent taxon: Empedobacter (ex Prévot 1961) Vandamme et al. 1994

Assigned by: Vandamme P, Bernardet JF, Segers P, Kersters K, Holmes B. New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int. J. Syst. Bacteriol. 1994; 44:827-831. 🇧🇪

Linking: To permanently link to this page, use https://lpsn.dsmz.de/species/empedobacter-brevisCopy to clipboardLink copied to clipboard

Record number: 775904