Name: Polaribacter atrinae Hyun et al. 2014

Category: Species

Proposed as: sp. nov.

Etymology: a.tri’nae. N.L. gen. fem. n. atrinae, of Atrina, the systematic name of a genus of comb pen shell, referring to the isolation of the type strain from Atrina pectinata

Gender: masculine

Type strain: JCM 19202; KACC 17473; WP25

Conduct genome-based taxonomy at

16S rRNA gene: KC878325 Analyse FASTA

Valid publication: Hyun DW, Shin NR, Kim MS, Kim PS, Jung MJ, Kim JY, Whon TW, Bae JW. Polaribacter atrinae sp. nov., isolated from the intestine of a comb pen shell, Atrina pectinata. Int J Syst Evol Microbiol 2014; 64:1654-1661.

IJSEM list: Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 64, part 5 of the IJSEM. Int J Syst Evol Microbiol 2014; 64:2509-2511.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

Risk group: 1

• Notes:
  • 🧬 The phylogenomic assignment score of this taxon is 0.03036 (N = 86).
  • 😷 The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1.
  • 🎓 Name mentioned 5 times in PubMed until 2024-03-27.
  • 🧍 The phylogenetic position of this species was determined in a genome-scale analysis by García-López et al. (2019). Publication: Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
  • 🧍 The phylogenetic position of this species was determined in a genome-scale analysis by Hahnke et al. (2016). Publication: Hahnke RL, Meier-Kolthoff JP, Garcia-Lopez M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Goker M. Genome-Based Taxonomic Classification of Bacteroidetes. Front Microbiol 2016; 7:2003.

Parent taxon: Polaribacter Gosink et al. 1998

Assigned by: Hyun DW, Shin NR, Kim MS, Kim PS, Jung MJ, Kim JY, Whon TW, Bae JW. Polaribacter atrinae sp. nov., isolated from the intestine of a comb pen shell, Atrina pectinata. Int J Syst Evol Microbiol 2014; 64:1654-1661.

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Record number: 791829