Species ***Pseudomonas* *oryzihabitans***

Name: Pseudomonas oryzihabitans Kodama et al. 1985

Category: Species

Proposed as: sp. nov.

Etymology: o.ry.zi’ha.bi.tans. L. fem. n. oryza, rice; L. pres. part. habitans, inhabiting; N.L. part. adj. oryzihabitans, rice inhabiting

Gender: feminine

Type strain: AJ 2197; ATCC 43272; CCUG 12540; CIP 102996; DSM 6835; IAM 1568; JCM 2952; KS0036; L-1; LMG 7040; NBRC 102199

See detailed strain information at

Conduct genome-based taxonomy at

16S rRNA gene: D84004 Analyse FASTA

Valid publication: Kodama K, Kimura N, Komagata K. Two new species of Pseudomonas: P. oryzihabitans isolated from rice paddy and clinical specimens and P. luteola isolated from clinical specimens. Int. J. Syst. Bacteriol. 1985; 35:467-474.

Nomenclatural status: validly published under the ICNP

Taxonomic status: correct name

Risk group: 2

Synonyms:

Name	Kind
Pseudomonas psychrotolerans Hauser et al. 2004	heterotypic synonym, validly published under the ICNP
Flavimonas oryzihabitans (Kodama et al. 1985) Holmes et al. 1987	homotypic synonym, validly published under the ICNP

Notes:
- According to Lalucat et al. (2020), this species is an earlier heterotypic synonym of Pseudomonas psychrotolerans Hauser et al. 2004. Publication: Lalucat J, Mulet M, Gomila M, Garcia-Valdes E. Genomics in Bacterial Taxonomy: Impact on the Genus Pseudomonas. Genes (Basel) 2020; 11:0.
- Synonymy of this taxon was mentioned in an IJSEM list. Publication: Oren A, Garrity GM. List of changes in taxonomic opinion no. 35. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2022; 72:5164.
- According to Bartlett et al. (2022), this species is an established human pathogen. Publication: Bartlett A, Padfield D, Lear L, Bendall R, Vos M. A comprehensive list of bacterial pathogens infecting humans. Microbiology 2022; 168:0.
- On page 473, the type strain is incorrectly cited as JCM 2592. Publication: Euzeby JP. List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet. Int J Syst Bacteriol 1997; 47:590-592.
- Reassessment of taxonomic status IJSB 47:251. Publication: Anzai Y, Kudo Y, Oyaizu H. The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera. Int J Syst Bacteriol 1997; 47:249-251.
- The level of similarity between the 16S rRNA sequence of the strain KS0036 L-1 AJ 2197 IAM 1568 JCM 2952 (the type strain of the species Pseudomonas oryzihabitans Kodama et al. 1985) and the 16S rRNA of the strain DSM 50071 ATCC 10145 [the type strain of the species Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)] is 93.9%. This result suggests that Flavimonas Holmes et al. 1987 is a later synonym of Pseudomonas Migula 1894 (Approved Lists 1980) and that the name Pseudomonas oryzihabitans should be used for this species. Publication: Holmes B, Steigerwalt AG, Weaver RE, Brenner DJ. Chryseomonas luteola comb. nov. and Flavimonas oryzihabitans gen. nov., comb. nov., Pseudomonas-like species from human clinical specimens and formerly known, respectively, as groups Ve-1 and Ve-2. Int. J. Syst. Bacteriol. 1987; 37:245-250.

Parent taxon: Pseudomonas Migula 1894 (Approved Lists 1980)

Assigned by: Kodama K, Kimura N, Komagata K. Two new species of Pseudomonas: P. oryzihabitans isolated from rice paddy and clinical specimens and P. luteola isolated from clinical specimens. Int. J. Syst. Bacteriol. 1985; 35:467-474.

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Record number: 780082

This LPSN page was printed on 2023-02-08 14:18:32

Species Pseudomonas oryzihabitans

Species ***Pseudomonas* *oryzihabitans***