Species Rickettsia japonica
Name: Rickettsia japonica Uchida et al. 1992
Etymology: ja.po’ni.ca. N.L. fem. adj. japonica, pertaining to Japan, the country from which the first isolates were identified
Type strain: ATCC VR-1363; YH
Conduct genome-based taxonomy at
16S rRNA gene:
AP011533
Analyse
FASTA
Valid publication:
Uchida T, Uchiyama T, Kumano K, Walker DH. Rickettsia japonica sp. nov., the etiological agent of spotted fever group rickettsiosis in Japan. Int J Syst Bacteriol 1992; 42:303-305. 
IJSEM list:
Anonymous. Validation list no. 42. Validation of publication of new names and new combinations previously effectively published outside the IJSB. Int J Syst Bacteriol 1992; 42:511.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Emendations:
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
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Notes:
- 🧬 The phylogenomic assignment score of this taxon is 0.26536 (N = 2).
- 😷 The risk group for Belgium has been imported on 2024-02-05. The full classification is: risk group = 2, note = "human pathogen". — The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 3, note = "Animal classification RG: 1 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No". — The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 3. — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 3, note = "Z". — The risk group for United Kingdom has been imported on 2024-01-31. The full classification is: risk group = 3.
- 🎓 Name mentioned 138 times in PubMed until 2024-03-27.
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🧍 According to Bartlett et al. (2022), this species is an established human pathogen.
Publication:
Bartlett A, Padfield D, Lear L, Bendall R, Vos M. A comprehensive list of bacterial pathogens infecting humans. Microbiology 2022; 168:0.
Parent taxon: Rickettsia da Rocha-Lima 1916 (Approved Lists 1980)
Assigned by:
Uchida T, Uchiyama T, Kumano K, Walker DH. Rickettsia japonica sp. nov., the etiological agent of spotted fever group rickettsiosis in Japan. Int J Syst Bacteriol 1992; 42:303-305.
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Record number: 784792
This LPSN page was printed on 2024-04-25 08:30:45