Species Xanthomonas oryzae
Name: Xanthomonas oryzae (ex Ishiyama 1922) Swings et al. 1990
Proposed as: sp. nov., nom. rev.
Etymology: o.ry’zae. L. gen. fem. n. oryzae, of rice (of Oryza)
Type strain: ATCC 35933; CFBP 2532; Dye YK9; ICMP 3125; LMG 5047; NCCPPB 3002; PDDCC 3125; Rao X08
Conduct genome-based taxonomy at
16S rRNA gene:
X95921
Analyse
FASTA
Valid publication:
Swings J, Van Den Mooter M, Vauterin L, Hoste B, Gillis M, Mew TW, Kersters K. Reclassification of the causal agents of bacterial blight (Xanthomonas campestris pv. oryzae) and bacterial leaf streak (Xanthomonas campestris pv. oryzicola) of rice as pathovars of Xanthomonas oryzae (ex Ishiyama 1922) sp. nov., nom. rev. Int. J. Syst. Bacteriol. 1990; 40:309-311. 
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Emendations:
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van den Mooter and Swings 1990
Van den Mooter M, Swings J. Numerical analysis of 295 phenotypic features of 266 Xanthomonas strains and related strains and an improved taxonomy of the genus. Int J Syst Bacteriol 1990; 40:348-369.
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van den Mooter and Swings 1990
Van den Mooter M, Swings J. Numerical analysis of 295 phenotypic features of 266 Xanthomonas strains and related strains and an improved taxonomy of the genus. Int J Syst Bacteriol 1990; 40:348-369.
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Notes:
- 😷 The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 1, note = "PP". — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1, note = "p2".
- 🎓 Name mentioned 1627 times in PubMed until 2024-03-27.
- 🧍 Plant pathogenic according to Bull et al. (2007). Publication: Bull CT, De Boer SH, Denny TP, Firrao G, Fischer Le Saux M, Saddler GS, Scortichini M, Stead DE, Takikawa Y. Comprehensive list of names of plant pathogenic bacteria, 1980-2007. Journal of Plant Pathology 2010; 92:551-592.
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🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.
Publication:
Mukherjee S, Seshadri R, Varghese NJ, Eloe-Fadrosh EA, Meier-Kolthoff JP, Goker M, Coates RC, Hadjithomas M, Pavlopoulos GA, Paez-Espino D, et al. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nat Biotechnol 2017; 35:676-683.
- 🧍 This species includes Xanthomonas oryzae pv. Oryzae [= Xanthomonas campestris pv. Oryza (Ishiyama 1922) Dye 1978] and Xanthomonas oryzae pv. Oryzicola [= Xanthomonas campestris pv. Oryzicola (Fang et al. 1957) Dye 1978]. Publication: Dowson WJ. On the systematic position and generic names of the Gram negative bacterial plant pathogens. Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene, Abteilung II 1939; 100:177-193.
Parent taxon: Xanthomonas Dowson 1939 (Approved Lists 1980)
Assigned by:
Swings J, Van Den Mooter M, Vauterin L, Hoste B, Gillis M, Mew TW, Kersters K. Reclassification of the causal agents of bacterial blight (Xanthomonas campestris pv. oryzae) and bacterial leaf streak (Xanthomonas campestris pv. oryzicola) of rice as pathovars of Xanthomonas oryzae (ex Ishiyama 1922) sp. nov., nom. rev. Int. J. Syst. Bacteriol. 1990; 40:309-311.
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Record number: 783143
This LPSN page was printed on 2024-04-19 15:24:03