Species Spirochaeta africana
Name: Spirochaeta africana Zhilina et al. 1996
Etymology: a.fri.ca’na. L. fem. adj. africana, of Africa, found in African alkaline Lake Magadi
Type strain: ATCC 700263; DSM 8902; Z-7692
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
X93928
Analyse
FASTA
Valid publication:
Zhilina TN, Zavarzin GA, Rainey F, Kevbrin VV, Kostrikina NA, Lysenko AM. Spirochaeta alkalica sp. nov., Spirochaeta africana sp. nov., and Spirochaeta asiatica sp. nov., alkaliphilic anaerobes from the Continental Soda Lakes in Central Asia and the East African Rift. Int J Syst Bacteriol 1996; 46:305-312. 
IJSEM list:
Anonymous. Notification list. Notification that new names and new combinations have appeared in volume 46, part 1 of the IJSB. Int J Syst Bacteriol 1996; 46:627.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Emendations:
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
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Hördt et al. 2020
Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M. Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria. Front Microbiol 2020; 11:468.
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Notes:
- 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No". — The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 1. — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1.
- 🎓 Name mentioned 5 times in PubMed until 2024-03-27.
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🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.
Publication:
Liolos K, Abt B, Scheuner C, Teshima H, Held B, Lapidus A, Nolan M, Lucas S, Deshpande S, Cheng JF, et al. Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift. Stand Genomic Sci 2013; 8:165-176.
Parent taxon: Spirochaeta Ehrenberg 1835 (Approved Lists 1980)
Assigned by:
Zhilina TN, Zavarzin GA, Rainey F, Kevbrin VV, Kostrikina NA, Lysenko AM. Spirochaeta alkalica sp. nov., Spirochaeta africana sp. nov., and Spirochaeta asiatica sp. nov., alkaliphilic anaerobes from the Continental Soda Lakes in Central Asia and the East African Rift. Int J Syst Bacteriol 1996; 46:305-312.
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Record number: 781071
This LPSN page was printed on 2024-04-24 21:26:09