Species Deinococcus ficus
Name: Deinococcus ficus Lai et al. 2006
Etymology: fi’cus. N.L. fem. n. Ficus, a fig tree and the name of a botanical genus; N.L. gen. fem. n. ficus, of Ficus, referring to the isolation of the type strain from the rhizosphere of Ficus religiosa L.
Type strain: CC-FR2-10; CCUG 51391; CIP 108832
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
AY941086
Analyse
FASTA
Valid publication:
Lai WA, Kampfer P, Arun AB, Shen FT, Huber B, Rekha PD, Young CC. Deinococcus ficus sp. nov., isolated from the rhizosphere of Ficus religiosa L. Int J Syst Evol Microbiol 2006; 56:787-791. 
IJSEM list:
Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 56, part 4 of the IJSEM. Int J Syst Evol Microbiol 2006; 56:1461-1462.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Synonyms:
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Name Kind Deinococcus mumbaiensis Shashidhar and Bandekar 2006 heterotypic synonym, validly published under the ICNP
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Emendations:
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Kämpfer 2009
Kampfer P. Deinococcus mumbaiensis Shashidhar and Bandekar 2006 is a later heterotypic synonym of Deinococcus ficus Lai et al. 2006. Int J Syst Evol Microbiol 2009; 59:365-366.
Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 59, part 2 of the IJSEM. Int J Syst Evol Microbiol 2009; 59:926-927.
Notes:- 🫂 Emendation accompanied by a proposal regarding the synonymy of the species.
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García-López et al. 2019
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
Notes:- 🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.
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Kämpfer 2009
Kampfer P. Deinococcus mumbaiensis Shashidhar and Bandekar 2006 is a later heterotypic synonym of Deinococcus ficus Lai et al. 2006. Int J Syst Evol Microbiol 2009; 59:365-366.
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Notes:
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⏰ According to Kaempfer (2009), this species is an earlier heterotypic synonym of Deinococcus mumbaiensis Shashidhar and Bandekar 2006.
Publication:
Kampfer P. Deinococcus mumbaiensis Shashidhar and Bandekar 2006 is a later heterotypic synonym of Deinococcus ficus Lai et al. 2006. Int J Syst Evol Microbiol 2009; 59:365-366.
- 🧬 The phylogenomic assignment score of this taxon is 0.14168 (N = 1).
- 😷 The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1.
- 🎓 Name mentioned 14 times in PubMed until 2024-03-28.
- 🧍 In the paper by Lai et al. 2006, the type strain CCUG 51391 is erroneously cited as CCUG 53391. — Falsen E. Personal communication, 2006-06-26.
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⏰ According to Kaempfer (2009), this species is an earlier heterotypic synonym of Deinococcus mumbaiensis Shashidhar and Bandekar 2006.
Publication:
Kampfer P. Deinococcus mumbaiensis Shashidhar and Bandekar 2006 is a later heterotypic synonym of Deinococcus ficus Lai et al. 2006. Int J Syst Evol Microbiol 2009; 59:365-366.
Parent taxon: Deinococcus Brooks and Murray 1981
Assigned by:
Lai WA, Kampfer P, Arun AB, Shen FT, Huber B, Rekha PD, Young CC. Deinococcus ficus sp. nov., isolated from the rhizosphere of Ficus religiosa L. Int J Syst Evol Microbiol 2006; 56:787-791.
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Record number: 783725
This LPSN page was printed on 2024-04-26 19:31:55