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Species Pedobacter ruber
Name: Pedobacter ruber Margesin and Zhang 2013
Etymology: ru’ber. L. masc. adj. ruber, red coloured, referring to the pigmentation of the bacterium
Pronunciation, gender: RU-ber, masculine
Type strain: DSM 24536; LMG 26240; W1
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
HQ882803
Analyse
FASTA
Valid publication:
Margesin R, Zhang DC. Pedobacter ruber sp. nov., a psychrophilic bacterium isolated from soil. Int J Syst Evol Microbiol 2013; 63:339-344. 
IJSEM list:
Euzeby JP. Notification list. Notification that new names and new combinations have appeared in volume 63, part 1 of the IJSEM. Int J Syst Evol Microbiol 2013; 63:1211-1213.
Nomenclatural status: validly published under the ICNP
Correct name: Daejeonella rubra (Margesin and Zhang 2013) García-López et al. 2020
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Synonyms:
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Name Kind Daejeonella rubra (Margesin and Zhang 2013) García-López et al. 2020 homotypic synonym, validly published under the ICNP
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Notes:
- ❗ Pedobacter ruber is the correct name instead if this species is regarded as a separate species (i.e., if its nomenclatural type is not assigned to another species whose name is validly published, legitimate and not rejected and has priority) within a separate genus Pedobacter.
- 😷 The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1. — If in doubt, use the risk group given in the regulations for your country and, if these are not available, use the risk group given in the catalogue of the culture collection from which you have obtained or intend to obtain the strain.
- 🎓 Name mentioned 1 time in PubMed until 2025-06-04.
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🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.
Publication:
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
Parent taxon: Pedobacter Steyn et al. 1998
Assigned by:
Margesin R, Zhang DC. Pedobacter ruber sp. nov., a psychrophilic bacterium isolated from soil. Int J Syst Evol Microbiol 2013; 63:339-344.
Linking: To permanently link to this page, use https://lpsn.dsmz.de/species/pedobacter-ruberLink copied to clipboard
Record number: 790453
This LPSN page was printed on 2025-12-17 12:20:46