Species Spirosoma oryzae
Name: Spirosoma oryzae Ahn et al. 2014
Etymology: o.ry’zae. L. gen. fem. n. oryzae, of rice, referring to the isolation of the type strain from a rice field
Type strain: DSM 28354; KACC 17324; RHs22
See detailed strain information at
Conduct genome-based taxonomy at
16S rRNA gene:
KJ155688
Analyse
FASTA
Valid publication:
Ahn JH, Weon HY, Kim SJ, Hong SB, Seok SJ, Kwon SW. Spirosoma oryzae sp. nov., isolated from rice soil and emended description of the genus Spirosoma. Int J Syst Evol Microbiol 2014; 64:3230-3234. 
IJSEM list:
Oren A, Garrity GM. Notification list. Notification that new names and new combinations have appeared in volume 64, part 9 of the IJSEM. Int J Syst Evol Microbiol 2014; 64:3923-3925.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Emendations:
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García-López et al. 2019
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
Oren A, Garrity GM. List of changes in taxonomic opinion no. 32. Notification of changes in taxonomic opinion previously published outside the IJSEM. Int J Syst Evol Microbiol 2020; 70:4061-4090.
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García-López et al. 2019
Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M. Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes. Front Microbiol 2019; 10:2083.
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Notes:
- 😢 The terminology used by the authors is in line with many other taxonomic studies and does not negatively affect their main results; some improvements may nevertheless be possible. Contrasting the term "chemotaxonomic" with "phenotypic" is not recommended. Using the term "phylogenetic data" (or equivalent) for sequence data is not advocated. Whether taxa can have "members" is debatable. See the LPSN phylogeny page for details. Publication: Göker M. What can genome analysis offer for bacteria? In: Bridge P, Smith D, Stackebrandt E (eds), Trends in the systematics of bacteria and fungi, CAB International, Wallingford, 2021, p. 255-281.
- 😷 The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 1.
- 🎓 Name mentioned 3 times in PubMed until 2024-03-27.
Parent taxon: Spirosoma Migula 1894 (Approved Lists 1980)
Assigned by:
Ahn JH, Weon HY, Kim SJ, Hong SB, Seok SJ, Kwon SW. Spirosoma oryzae sp. nov., isolated from rice soil and emended description of the genus Spirosoma. Int J Syst Evol Microbiol 2014; 64:3230-3234.
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Record number: 792136
This LPSN page was printed on 2024-04-25 00:00:46