Genus Lysinimicrobium
Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (→) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).
Number of species, including synonyms, cited in this file: 11
Number of subspecies, including synonyms, cited in this file: 0
Classification (Warning: see also the file "Classification of prokaryotes: Introduction").
Lysinimicrobium Hamada et al. 2012, gen. nov.
Type species: ¤ Lysinimicrobium mangrovi Hamada et al. 2012.
Etymology: N.L. n. lysinum, lysine; N.L. neut. n. microbium, microbe; N.L. neut. n. Lysinimicrobium, a microbe with lysine in the cell wall.
Valid publication: HAMADA (M.), TAMURA (T.), YAMAMURA (H.), SUZUKI (K.I.) and HAYAKAWA (M.): Lysinimicrobium mangrovi gen. nov., sp. nov., an actinobacterium isolated from the rhizosphere of a mangrove. Int. J. Syst. Evol. Microbiol., 2012, 62, 1731-1735.
Original article in IJSEM Online
→ Lysinimicrobium Hamada et al. 2012 emend. Hamada et al. 2015.
Reference: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article.
Lysinimicrobium aestuarii Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-104=NBRC 109392=DSM 28144 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042202.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. gen. n. aestuarii, of a tidal flat.
Source: Environmental - marine.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium flavum Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-45=NBRC 109391=DSM 28150 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042201.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. neut. adj. flavum, yellow.
Source: Plant.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium gelatinilyticum Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-44=NBRC 109390=DSM 28149 .
Sequence accession no. (16S rRNA gene) for the type strain: LC044220.
Whole-genome sequence accession no. for the type strain: -.
Etymology: N.L. neut. n. gelatinum, gelatin; N.L. neut. adj. lyticum (from Gr. neut. adj. lyticon), able to loosen; N.L. neut. adj. gelatinilyticum, gelatin-dissolving.
Source: Plant.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium iriomotense Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-143=NBRC 109399=DSM 28146 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042212.
Whole-genome sequence accession no. for the type strain: -.
Etymology: N.L. neut. adj. iriomotense, pertaining to Iriomote Island, Japan, where the type strain was isolated.
Source: Plant.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium luteum Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-123=NBRC 109395=DSM 28147.
Sequence accession no. (16S rRNA gene) for the type strain: LC042208.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. neut. adj. luteum, yellow.
Source: Environmental - soil.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium mangrovi Hamada et al. 2012, sp. nov. (Type species of the genus.)
Type strain: (see also Global Catalogue of Microorganisms) HI08-69 = DSM 24868 = NBRC 105856.
Sequence accession no. (16S rRNA gene) for the type strain: AB639012.
Etymology: N.L. gen. n. mangrovi, of a mangrove, referring to the isolation of the type strain from the rhizosphere of a mangrove.
Valid publication: HAMADA (M.), TAMURA (T.), YAMAMURA (H.), SUZUKI (K.I.) and HAYAKAWA (M.): Lysinimicrobium mangrovi gen. nov., sp. nov., an actinobacterium isolated from the rhizosphere of a mangrove. Int. J. Syst. Evol. Microbiol., 2012, 62, 1731-1735.
Original article in IJSEM Online
Lysinimicrobium pelophilum Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-111=NBRC 109393=DSM 28148 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042204.
Whole-genome sequence accession no. for the type strain: -.
Etymology: Gr. n. pelos, mud; Gr. adj. philos, loving; N.L. neut. adj. pelophilum, mud-loving.
Source: Environmental - marine.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium rhizosphaerae Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-135=NBRC 109397=DSM 28152 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042210.
Whole-genome sequence accession no. for the type strain: -.
Etymology: Gr. neut. n. rhiza, a root: L. n. sphaera, ball, sphere; N.L. gen. n. rhizosphaerae, of the rhizosphere.
Source: Plant.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium sediminis Hamada et al. 2017, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HT7-17=NBRC 112286=TBRC 7037.
Sequence accession no. (16S rRNA gene) for the type strain: LC203062.
Etymology: L. gen. n. sediminis, of sediment.
Source: Environmental - marine.
Valid publication: HAMADA, M., SAITOU, S., TERAHARA, T., IMADA, C. and TAMURA, T. 2017. Lysinimicrobium sediminis sp. nov., an actinobacterium isolated from estuary sediment. Int. J. Syst. Evol. Microbiol., 67, 3393-3397.
Original article in IJSEM Online
Lysinimicrobium soli Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-122=NBRC 109394=DSM 28151 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042207.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. gen. n. soli, of soil.
Source: Environmental - soil.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online
Lysinimicrobium subtropicum Hamada et al. 2015, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) HI12-128=NBRC 109396=DSM 28145 .
Sequence accession no. (16S rRNA gene) for the type strain: LC042209.
Whole-genome sequence accession no. for the type strain: -.
Etymology: L. pref. sub, under, below, slightly; L. neut. adj. tropicum, tropical; N.L. neut. adj. subtropicum, subtropical, referring to the subtropical region.
Source: Plant.
Valid publication: HAMADA, M., SHIBATA, C., SAITOU, S., TAMURA, T., KOMAKI, H., ICHIKAWA, N., OGUCHI, A., HOSOYAMA, A., FUJITA, N., YAMAMURA, H., HAYAKAWA, M. and SUZUKI, K. 2015. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium. Int. J. Syst. Evol. Microbiol., 65, 4394-4402.
Original article in IJSEM Online