Genus Olivibacter
Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (→) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).
Number of species, including synonyms, cited in this file: 9
Number of subspecies, including synonyms, cited in this file: 0
Classification (Warning: see also the file "Classification of prokaryotes: Introduction").
Olivibacter Ntougias et al. 2007, gen. nov.
Type species: ¤ Olivibacter sitiensis Ntougias et al. 2007.
Etymology: L. n. oliva, olive; N.L. masc. n. bacter, a rod; N.L. masc. n. Olivibacter, a rod-shaped bacterium from olives/olive processing by-product.
Valid publication: NTOUGIAS (S.), FASSEAS (C.) and ZERVAKIS (G.I.): Olivibacter sitiensis gen. nov., sp. nov., isolated from alkaline olive-oil mill wastes in the region of Sitia, Crete. Int. J. Syst. Evol. Microbiol., 2007, 57, 398-404.
Original article in IJSEM Online
Olivibacter composti Lin et al. 2017, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) CC-KYC063=BCRC 80939=JCM 31198.
Sequence accession no. (16S rRNA gene) for the type strain: KU358715.
Etymology: N.L. gen. n. composti, of compost.
Source: Environmental.
Valid publication: LIN, S. Y., HAMEED, A., CHIU, K. Y., LIU, Y. C., HSU, Y. H., LAI, W. A. and YOUNG, C. C. 2017. Olivibacter composti sp. nov., isolated from compost collected at a greenhouse. Int. J. Syst. Evol. Microbiol., 67, 148-152.
Original article in IJSEM Online
Olivibacter domesticus Siddiqi et al. 2018, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) DC186=CCUG 54353LMG 23837.
Sequence accession no. (16S rRNA gene) for the type strain: AM407725.
Basonym: ¤ Pseudosphingobacterium domesticum Vaz-Moreira et al. 2007.
Etymology: L. masc. adj. domesticus, of or belonging to the house-made compost.
Source: Environmental.
Valid publication: SIDDIQI, M. Z., LIU, Q., LEE, S. Y., CHOI, K. D. and IM, W. T. 2018. Olivibacter ginsenosidimutans sp. nov., with ginsenoside converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov. Int. J. Syst. Evol. Microbiol., 68, 2509-2514.
Original article in IJSEM Online
Olivibacter ginsengisoli Wang et al. 2008, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) Gsoil 060 = KCTC 12646 = LMG 23491.
Sequence accession no. (16S rRNA gene) for the type strain: AB267716.
Etymology: N.L. n. ginsengum, ginseng; L. n. solum, soil; N.L. gen. n. ginsengisoli, of soil of a ginseng field.
Valid publication: WANG (L.), TEN (L.N.), LEE (H.G.), IM (W.T.) and LEE (S.T.): Olivibacter soli sp. nov., Olivibacter ginsengisoli sp. nov. and Olivibacter terrae sp. nov., from soil of a ginseng field and compost in South Korea. Int. J. Syst. Evol. Microbiol., 2008, 58, 1123-1127.
Original article in IJSEM Online
Olivibacter ginsenosidimutans Siddiqi et al. 2018, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) BS18=KACC 16612=JCM 18200.
Sequence accession no. (16S rRNA gene) for the type strain: JQ349042.
Etymology: N.L. n. ginsenosidum, ginsenoside; L. pres. part. mutans, transforming, converting; N.L. part. adj. ginsenosidimutans, ginsenoside-converting.
Source: Environmental.
Valid publication: SIDDIQI, M. Z., LIU, Q., LEE, S. Y., CHOI, K. D. and IM, W. T. 2018. Olivibacter ginsenosidimutans sp. nov., with ginsenoside converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov. Int. J. Syst. Evol. Microbiol., 68, 2509-2514.
Original article in IJSEM Online
Olivibacter jilunii Chen et al. 2013, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) 14-2A = CCTCC AB 2010105 = KCTC 23098.
Sequence accession no. (16S rRNA gene) for the type strain: HQ848949.
Etymology: N.L. gen. masc. n. jilunii, of Ji-Lun, to honour Ji-Lun Li, a respected Chinese microbiologist, for his enormous contributions to the development of microbiology in China.
Valid publication: CHEN (K.), TANG (S.K.), WANG (G.L.), NIE (G.X.), LI (Q.F.), ZHANG (J.D.), LI (W.J.) and LI (S.P.): Olivibacter jilunii sp. nov., isolated from DDT-contaminated soil. Int. J. Syst. Evol. Microbiol., 2013, 63, 1083-1088.
Original article in IJSEM Online
Note: In the etymology provided by Chen et al. 2013, the neo-Latin noun jilunii is erroneously cited as jilun.
Olivibacter oleidegradans Szabó et al. 2011, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) TBF2/20.2 = CCM 7765 = NCAIM B 02393.
Sequence accession no. (16S rRNA gene) for the type strain: HM021726.
Etymology: L. n. oleum, oil; L. part. adj. degradans, returning to the original order, referring to the ability of the type strain to degrade oil (hydrocarbons); N.L. part. adj. oleidegradans, capable of degrading oil (hydrocarbons).
Valid publication: SZABÓ (I.), SZOBOSZLAY (S.), KRISZT (B.), HÁHN (J.), HARKAI (P.), BAKA (E.), TÁNCSICS (A.), KASZAB (E.), PRIVLER (Z.) and KUKOLYA (J.): Olivibacter oleidegradans sp. nov., a hydrocarbon-degrading bacterium isolated from a biofilter clean-up facility on a hydrocarbon-contaminated site. Int. J. Syst. Evol. Microbiol., 2011, 61, 2861-2865.
Original article in IJSEM Online
Note: In the species description (protologue), the strain NCAIM B 02393 is cited as NCAIMB 02393.
Olivibacter sitiensis Ntougias et al. 2007, sp. nov. (Type species of the genus.)
Type strain: (see also Global Catalogue of Microorganisms) AW-6 = CECT 7133 = DSM 17696.
Sequence accession no. (16S rRNA gene) for the type strain: DQ421387.
Etymology: N.L. masc. adj. sitiensis, pertaining to Sitia (north-east Crete, Greece) the vicinity in which the olive-oil mill by-product was obtained.
Valid publication: NTOUGIAS (S.), FASSEAS (C.) and ZERVAKIS (G.I.): Olivibacter sitiensis gen. nov., sp. nov., isolated from alkaline olive-oil mill wastes in the region of Sitia, Crete. Int. J. Syst. Evol. Microbiol., 2007, 57, 398-404.
Original article in IJSEM Online
Olivibacter soli Wang et al. 2008, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) Gsoil 034 = KCTC 12645 = LMG 23492.
Sequence accession no. (16S rRNA gene) for the type strain: AB267715.
Etymology: L. gen. n. soli, of the soil.
Valid publication: WANG (L.), TEN (L.N.), LEE (H.G.), IM (W.T.) and LEE (S.T.): Olivibacter soli sp. nov., Olivibacter ginsengisoli sp. nov. and Olivibacter terrae sp. nov., from soil of a ginseng field and compost in South Korea. Int. J. Syst. Evol. Microbiol., 2008, 58, 1123-1127.
Original article in IJSEM Online
Olivibacter terrae Wang et al. 2008, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) Jip13 = KCTC 12644 = LMG 23494.
Sequence accession no. (16S rRNA gene) for the type strain: AB267714.
Etymology: L. gen. n. terrae, of the earth.
Valid publication: WANG (L.), TEN (L.N.), LEE (H.G.), IM (W.T.) and LEE (S.T.): Olivibacter soli sp. nov., Olivibacter ginsengisoli sp. nov. and Olivibacter terrae sp. nov., from soil of a ginseng field and compost in South Korea. Int. J. Syst. Evol. Microbiol., 2008, 58, 1123-1127.
Original article in IJSEM Online