Species Helicobacter rodentium
Name: Helicobacter rodentium Shen et al. 1997
Etymology: ro.den’ti.um. N.L. gen. neut. pl. n. rodentium, of rodents, of gnawing animals, referring to the first reported source (mice); from L. pres. part. rodens, gnawing
Type strain: ATCC 700285; MIT 95-1707
Conduct genome-based taxonomy at
16S rRNA gene:
U96296
Analyse
FASTA
Valid publication:
Shen Z, Fox JG, Dewhirst FE, Paster BJ, Foltz CJ, Yan L, Shames B, Perry L. Helicobacter rodentium sp. nov., a urease-negative Helicobacter species isolated from laboratory mice. Int J Syst Bacteriol 1997; 47:627-634. 
IJSEM list:
Anonymous. Notification list. Notification that new names and new combinations have appeared in volume 47, part 3 of the IJSB. Int J Syst Bacteriol 1997; 47:1275-1276.
Nomenclatural status: validly published under the ICNP
Taxonomic status: correct name
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Synonyms:
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Name Kind "Pseudohelicobacter rodentium" (Shen et al. 1997) Waite et al. 2019 homotypic synonym, not validly published
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Notes:
- 🧬 The phylogenomic assignment score of this taxon is 0.02194 (N = 1).
- 😷 The risk group for Canada has been imported on 2024-02-27. The full classification is: risk group = 1, note = "Animal classification RG: 2 - Security sensitive biological agent: No - Terrestrial animal pathogen under Canadian Food Inspection Agency authority: No - Containment level: Containment Level 2". — The risk group for Swiss Confederation has been imported on 2024-02-01. The full classification is: risk group = 2, note = "PV". — The risk group for Germany has been imported on 2023-10-29. The full classification is: risk group = 2, note = "t".
- 🎓 Name mentioned 20 times in PubMed until 2024-03-28.
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🧍 The genome of the type strain was sequenced as part of the GEBA (Genomic Encyclopedia of Bacteria and Archaea) project.
Publication:
Mukherjee S, Seshadri R, Varghese NJ, Eloe-Fadrosh EA, Meier-Kolthoff JP, Goker M, Coates RC, Hadjithomas M, Pavlopoulos GA, Paez-Espino D, et al. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nat Biotechnol 2017; 35:676-683.
Parent taxon: Helicobacter Goodwin et al. 1989
Assigned by:
Shen Z, Fox JG, Dewhirst FE, Paster BJ, Foltz CJ, Yan L, Shames B, Perry L. Helicobacter rodentium sp. nov., a urease-negative Helicobacter species isolated from laboratory mice. Int J Syst Bacteriol 1997; 47:627-634.
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Record number: 784003
This LPSN page was printed on 2024-04-28 16:31:41