Genus Salmonella
Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (→) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).
Number of species, including synonyms, cited in this file: 9
Number of subspecies, including synonyms, cited in this file: 14
Classification (Warning: see also the file "Classification of prokaryotes: Introduction").
For a detailed description of this taxon see Bergey’s Manual of Systematics of Archaea and Bacteria (BMSAB).
See also the files Salmonella nomenclature.
Note
Before the publication of the Judicial Opinion 80 and its accompanying commentary (both published in the January 2005 issue of the IJSEM), the nomenclature of the genus Salmonella was regulated by two systems: one system conforms to the Rules of the Bacteriological Code (1990 Revision) and one system not in accordance with the Rules.
The system conforms to the Rules was used by a minority of bacteriologists.
In this system, the type species of the genus Salmonella is Salmonella cholereasuis (type strain ATCC 13312 and the genus Salmonella encompasses 14 validly published names of species, subspecies, and new combinations: Salmonella arizonae, Salmonella bongori, Salmonella choleraesuis, Salmonella choleraesuis subsp. arizonae, Salmonella choleraesuis subsp. bongori, Salmonella choleraesuis subsp. choleraesuis, Salmonella choleraesuis subsp. diarizonae, Salmonella choleraesuis subsp. houtenae, Salmonella choleraesuis subsp. indica, Salmonella choleraesuis subsp. salamae, Salmonella enteritidis, Salmonella paratyphi, Salmonella typhi, and Salmonella typhimurium.
The other system, proposed in 1987 by Le Minor and Popoff, did not conform to the Rules, because the Request for an Opinion published by these authors was not granted by the Judicial Commission. However, the proposal by Le Minor an Popoff has received wide acceptance and was used by an ever increasing majority of bacteriologists.
Le Minor and Popoff requested that Salmonella enterica (type strain LT2) is the type and only species of the genus Salmonella. These authors proposed the following new subspecies and new combinations: "Salmonella enterica subsp. arizonae", "Salmonella enterica subsp. bongori", "Salmonella enterica subsp. enterica", "Salmonella enterica subsp. diarizonae", "Salmonella enterica subsp. houtenae", "Salmonella enterica subsp. indica", and "Salmonella enterica subsp. salamae".
Le Minor and Popoff also requested that the name Salmonella choleraesuis is a heterotypic synonym of "Salmonella enterica", and that Salmonella enteritidis, Salmonella typhi and Salmonella typhimurium are heterotypic synonyms of "Salmonella enterica subsp. enterica".
In 1999, Reeves et al. validly publihed the name of the new combination Salmonella bongori.
In 1999, Euzéby published a new Request for an Opinion in order to support the proposal by Le Minor and Popoff. This author requested that the type species of the genus Salmonella be "Salmonella enterica" (type strain ATCC 13312, this species being divided into 6 subspecies ("Salmonella enterica subsp. arizonae", "Salmonella enterica subsp. diarizonae", "Salmonella enterica subsp. enterica", "Salmonella enterica subsp. houtenae", "Salmonella enterica subsp. indica" and "Salmonella enterica subsp. salamae").
Moreover, to avoid further confusion Euzéby also requested (i) the rejection of the specific name Salmonella choleraesuis; and (ii) the conservation of the name Salmonella typhi, because the name "Salmonella enterica subsp. enterica" serovar Typhi, or Salmonella Typhi (shortened nomenclature recommended by Le Minor and Popoff) could lead to accidents that may endanger health and life [see, Rule 56a(5) Note 1].
In 2000 Ezaki, Amano, Kawamura & Yabuuchi validly publihed the name Salmonella paratyphi.
In 2000, Ezaki, Amano, Kawamura & Yabuuchi, Ezaki, Kawamura & Yabuuchi, and Yabuuchi & Ezaki requested (i) the conservation of the name Salmonella choleraesuis as the type species of the genus Salmonella; (ii) the recognition of the nomenclatural standing of Salmonella typhi, Salmonella enteritidis, and Salmonella typhimurium; (iii) the conservation of the names Salmonella enteritidis, Salmonella paratyphi, and Salmonella typhimurium; and (iv) the rejection of the name "Salmonella enterica".
On 29 and 30 July 2002, the Judicial Commission carefully discussed the request by Euzéby, the two requests by Ezaki et al., and the request by Yabuuchi & Ezaki. The Judicial Commission has also taken the request of Le Minor & Popoff into consideration.
The Judicial Commission has issued an Opinion (the Judicial Opinion 80) and decided (i) that Salmonella enterica becomes the type species of the genus Salmonella; (ii) that the epithet enterica in Salmonella enterica is conserved over all earlier epithets which may be applied to this species; (iii) that the type strain of Salmonella enterica is strain LT2 (= ATCC 43971= CIP 60.62 = NCIMB 11450 = NCTC 12416); (iv) that the subspecies and new combinations proposed by Le Minor and Popoff should be considered to be validly published, with the dates and authorship being assigned to these authors; (v) that the names Salmonella choleraesuis, Salmonella enteritidis, Salmonella paratyphi, Salmonella typhi, and Salmonella typhimurium are not included in the list of epitheta specifica conservanda (conserved specific epithets in names of species of bacteria) and (vi) that the name Salmonella choleraesuis, is not included in the list of epitheta specifica et subspecifica rejicienda (rejected specific and subspecific epithets in names of species and subspecies of bacteria).
As all Judicial Opinions, the Opinion 80 is limited to matters on nomenclature and does not help to interpret the taxonomic consequences.
The Judicial Commission did not reject the epithet choleraesuis in Salmonella choleraesuis and the major problem, following the Judicial Opinion 80, is that two systems of nomenclature are in use for the genus Salmonella: the "old" system (i.e. names validly published before publication of the Judicial Opinion 80, except that the type species of the genus must be Salmonella enterica), and a "new" system (i.e. names validly published as a consequence of the Judicial Opinion 80).
In order to help the bacteriologists to interpret both the nomenclatural and taxonomic consequences of the Opinion 80, Tindall et al. wrote an accompanying commentary. In this commentary, the authors provide a list of names that should be followed according to the ruling of the Judicial Commission together with the taxonomic interpretation of Le Minor and Popoff (1987) and Reeves et al. (1989). These names are underlined in the body of this file and they are listed below in alphabetic order.
It is important to note that all validly published names, even if they are not cited in the above list or not underlined in the body of this file, can be used by bacteriologists.
On March 18, 2005, a new species, Salmonella subterranea Shelobolina et al. 2005, was validly published by citation on Validation List 102. However, this species is closely related to Escherichia hermannii and does not belong to the genus Salmonella. See Salmonella subterranea.
A list of serovars is available on the Internet (see Patrick A.D. Grimont & François-Xavier Weill, ANTIGENIC FORMULAE OF THE SALMONELLA SEROVARS, 2007, 9th edition).
References:
DE VOS (P.), TRÜPER (H.G.) and TINDALL (B.J.): Judicial Commission of the International Committee on Systematics of Prokaryotes Xth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 28, 29 and 31 July and 1 August 2002, Paris, France. Int. J. Syst. Evol. Microbiol., 2005, 55, 525-532.
Original article by De Vos et al. 2005 in IJSEM Online
EUZÉBY (J.P.): Revised Salmonella nomenclature: designation of Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 sp. nov., nom. rev. as the neotype species of the genus Salmonella Lignieres 1900 (Approved Lists 1980), rejection of the name Salmonella choleraesuis (Smith 1894) Weldin 1927 (Approved Lists 1980), and conservation of the name Salmonella typhi (Schroeter 1886) Warren and Scott 1930 (Approved Lists 1980). Request for an Opinion. Int. J. Syst. Bacteriol., 1999, 49, 927-930.
Original article in IJSEM Online
EZAKI (T.), AMANO (M.), KAWAMURA (Y.) and YABUUCHI (E.): Proposal of Salmonella paratyphi sp. nov., nom. rev. and Request for an Opinion to conserve the specific epithet paratyphi in the binary combination Salmonella paratyphi as nomen epitheton conservandum. Int. J. Syst. Evol. Microbiol., 2000, 50, 941-944.
EZAKI (T.), KAWAMURA (Y.) and YABUUCHI (E.): Recognition of nomenclatural standing of Salmonella typhi (Approved Lists 1980), Salmonella enteritidis (Approved Lists 1980) and Salmonella typhimurium (Approved Lists 1980), and conservation of specific epithets enteritidis and typhimurium. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2000, 50, 945-947.
JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATIC BACTERIOLOGY: Minutes of the Meetings, 14 September 1990, Osaka, Japan. [Minutes 17 (i) and 18 (iii)]. Int. J. Syst. Bacteriol., 1991, 41, 185-187.
Original article in IJSEM Online
JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATIC BACTERIOLOGY: Minutes of the Meetings, 2 and 6 July 1994, Prague, Czech Republic. (Minute 7). Int. J. Syst. Bacteriol., 1995, 45, 195-196.
Original article in IJSEM Online
JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
REEVES (M.W.), EVINS (G.M.), HEIBA (A.A.), PLIKAYTIS (B.D.) and FARMER III (J.J.): Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis and proposal of Salmonella bongori comb. nov. J. Clin. Microbiol., 1989, 27, 313-320.
Original article Online
TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article in IJSEM Online
WAYNE (L.G.): Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for Opinions published between January 1985 and July 1993. Int. J. Syst. Bacteriol., 1994, 44, 177-178.
Original article in IJSEM Online
YABUUCHI (E.) and EZAKI (T.): Arguments against the replacement of type species of the genus Salmonella from Salmonella choleraesuis to 'Salmonella enterica' and the creation of the term 'neotype species', and for conservation of Salmonella choleraesuis. Int. J. Syst. Evol. Microbiol., 2000, 50, 1693-1694.
Original article in IJSEM Online
Salmonella Lignieres 1900, genus. (Type genus of the tribe ¤ Salmonelleae Kalz 1957 [Approved Lists 1980]).
Type species: ¤ Salmonella choleraesuis corrig. (Smith 1894) Weldin 1927 (Approved Lists 1980).
Etymology: N.L. fem. dim. n. Salmonella, named after D.E. Salmon, an American bacteriologist.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: LIGNIERES (J.): Maladies du porc. Bulletin of the Society for Central Medical Veterinarians ns, 1900, 18, 389-431.
→ Salmonella Lignieres 1900, genus. (Type genus of the tribe ¤ Salmonelleae Kalz 1957 [Approved Lists 1980]).
New type species: ¤ Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Etymology: N.L. fem. dim. n. Salmonella, named after D.E. Salmon, an American bacteriologist.
References:
1 SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition). [LIGNIERES (J.): Maladies du porc. Bulletin of the Society for Central Medical Veterinarians ns, 1900, 18, 389-431.]
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella arizonae (Borman 1957) Kauffmann 1964, species.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 13314= CCUG 6322 = CIP 82.30 = DSM 9386 = NCTC 8297.
Sequence accession no. (16S rRNA gene) for the type strain: AF008580.
Synonyms: "Salmonella arizona" (sic) Kauffmann 1940, "Arizona arizonae" Kauffmann and Edwards 1952, "Paracolobactrum arizonae" (Kauffmann 1940) Borman 1957, "Arizona hinshawii" Ewing 1969.
Etymology: N.L. gen. n. arizonae, of Arizona, a state in the USA.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: 1 BORMAN (E.K.): Genus IV. Paracolobactrum Borman et al., 1944, In: R.S. BREED, E.G.D. MURRAY and N.R. SMITH (editors): Bergey's Manual of Determinative Bacteriology, 7th edition, The Williams & Wilkins Co, Baltimore, 1957, pp. 346-348. 2 KAUFFMANN (F.). In: E. VAN OYE (ed.), The world problem of salmonellosis, Junk Publications, The Hague, 1964.
Notes:
1 In the title of the publication by van Oye, as cited in the Approved Lists of Bacterial Names and on the Approved Lists of Bacterial Names (Amended Edition), the word "salmonellosis" is erroneously written "slamonellosis".
2 On the Approved Lists of Bacterial Names and on the amended edition of the Approved Lists, this nomenclatural name is incorrectly cited Salmonella arizonae (Borman 1957) Kauffman (sic) 1964.
→ ¤ Salmonella choleraesuis subsp. arizonae corrig. (Borman 1957) Le Minor et al. 1985, comb. nov.
→ ¤ Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987, comb. nov.
Salmonella bongori (Le Minor et al. 1985) Reeves et al. 1989, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43975= CCUG 30042 = CIP 82.33 = DSM 13772 = NCTC 12419.
Sequence accession no. (16S rRNA gene) for the type strain: AF029227.
Basonym: ¤ Salmonella choleraesuis subsp. bongori Le Minor et al. 1985.
Other homotypic synonym: ¤ Salmonella enterica subsp. bongori (Le Minor et al. 1985) Le Minor and Popoff 1987.
Etymology: N.L. gen. n. bongori, of Bongor, a town in Chad.
Valid publication: Validation List no. 30. Int. J. Syst. Bacteriol., 1989, 39, 371.
Effective publication: REEVES (M.W.), EVINS (G.M.), HEIBA (A.A.), PLIKAYTIS (B.D.) and FARMER III (J.J.): Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis and proposal of Salmonella bongori comb. nov. J. Clin. Microbiol., 1989, 27, 313-320.
Validation List no. 30 in IJSEM Online - Effective publication Online
Salmonella choleraesuis corrig. (Smith 1894) Weldin 1927, species.
Type strain: (see also Global Catalogue of Microorganisms) F. Kauffmann 1348 (serovar Choleraesuis) = ATCC 13312= CIP 55.133 = DSM 14846 = JCM 1651 = NCTC 5735.
Sequence accession no. (16S rRNA gene) for the type strain: EU014681.
Synonym: "Bacillus cholerae-suis" Smith 1894.
Etymology: Gr. n. cholera, cholera; L. n. sus, hog; N.L. gen. n. choleraesuis, of cholera of a hog.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: 1 SMITH (T.): The hog-cholera group of bacteria. Bulletin of the United States Bureau of Animal Industry, 1894, 6, 6-40. 2 WELDIN (J.C.): The colon-typhoid group of bacteria and related forms. Relationships and classification. Iowa State Journal of Science, 1927, 1, 121-197.
Notes:
1 Subsequently, this species has been divided into subspecies (see: below).
2 The original spelling, Salmonella cholerae-suis (sic), has been corrected by Farmer 1983 [1], by Hill et al. 1984 [2], and by Howey et al. 1990 [3].
References:
1 FARMER III (J.J.): Correction of four specific epithets that are hyphenated in the Approved Lists of Bacterial Names 1980. Int. J. Syst. Bacteriol., 1983, 33, 425.
Original article in IJSEM Online
2 HILL (L.R.), SKERMAN (V.B.D.) and SNEATH (P.H.A.): Corrigenda to the Approved Lists of Bacterial Names edited for the International Committee on Systematic Bacteriology. Int. J. Syst. Bacteriol., 1984, 34, 508-511.
Original article in IJSEM Online
3 HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
3 The Request for an Opinion by Euzéby about the rejection of the name Salmonella choleraesuis (Int. J. Syst. Bacteriol., 1999, 49, 927-930) was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
Original article by Euzéby 1999 in IJSEM Online
4 The Request for an Opinion by Yabuuchi and Ezaki about the conservation of the name Salmonella choleraesuis (Int. J. Syst. Evol. Microbiol., 2000, 50, 1693-1694) was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
5 From January 2005, Salmonella choleraesuis corrig. (Smith 1894) Weldin 1927 (Approved Lists 1980) is no longer the type species of the genus Salmonella Lignieres 1900 (Approved Lists 1980).
References:
1 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
2 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
→ ¤ Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella choleraesuis corrig. (Smith 1894) Weldin 1927 (Approved Lists 1980) is a heterotypic synonym of ¤ Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella choleraesuis subsp. arizonae corrig. (Borman 1957) Le Minor et al. 1985, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 13314= CCUG 6322 = CIP 82.30 = DSM 9386 = NCTC 8297.
Sequence accession no. (16S rRNA gene) for the type strain: AF008580.
Basonym: ¤ Salmonella arizonae (Borman 1957) Kauffmann 1964 (Approved Lists 1980).
Other synonyms: "Salmonella arizona" (sic) Kauffmann 1940, "Arizona arizonae" Kauffmann and Edwards 1952, "Paracolobactrum arizonae" (Kauffmann 1940) Borman 1957, "Arizona hinshawii" Ewing 1969.
Etymology: N.L. gen. n. arizonae, of Arizona, a state in the USA.
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Note: The original spelling, Salmonella cholerae-suis (sic) subsp. arizonae, has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
→ ¤ Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987 comb. nov.
Salmonella choleraesuis subsp. bongori corrig. Le Minor et al. 1985, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43975= CCUG 30042 = CIP 82.33 = DSM 13772 = NCTC 12419.
Sequence accession no. (16S rRNA gene) for the type strain: AF029227.
Etymology: N.L. gen. n. bongori, of Bongor, a town in Chad.
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Note: The original spelling, Salmonella cholerae-suis (sic) subsp. bongori, has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
→ ¤ Salmonella enterica subsp. bongori (Le Minor et al. 1985) Le Minor and Popoff 1987, comb. nov.
→ ¤ Salmonella bongori (Le Minor et al. 1985) Reeves et al. 1989 comb. nov.
Salmonella choleraesuis subsp. choleraesuis corrig. (Smith 1894) Le Minor et al. 1985, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) F. Kauffmann 1348 (serovar Choleraesuis) = ATCC 13312= CIP 55.133 = DSM 14846 = JCM 1651 = NCTC 5735.
Sequence accession no. (16S rRNA gene) for the type strain: EU014681.
Etymology: Gr. n. cholera, cholera; L. n. sus, hog; N.L. gen. n. choleraesuis, of cholera of a hog.
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Notes:
1 The original authorship, (Smith 1894) Weldin 1927, was corrected according to the new Rule 40d.
Reference: GARRITY (G.M.), LABEDA (D.P.) and OREN (A.): Judicial Commission of the International Committee on Systematics of Prokaryotes. XIIth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 3, 4 and 6 August 2008, Istanbul, Turkey. Int. J. Syst. Evol. Microbiol., 2011, 61, 2775-2780.
Original article in IJSEM Online
2 The original spelling, Salmonella cholerae-suis (sic) subsp. cholerae-suis (sic), has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
3 The subspecies name Salmonella choleraesuis subsp. choleraesuis corrig. (Smith 1894) Le Minor et al. 1985 is automatically created by the valid publication of the following new subspecies and new combinations: ¤ Salmonella choleraesuis subsp. arizonae, ¤ Salmonella choleraesuis subsp. bongori, ¤ Salmonella choleraesuis subsp. diarizonae, ¤ Salmonella choleraesuis subsp. houtenae, and ¤ Salmonella choleraesuis subsp. salamae1985 [Rule 40d (formerly Rule 46)].
→ ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella choleraesuis subsp. choleraesuis corrig. (Smith 1894) Le Minor et al. 1985 is a heterotypic synonym of ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella choleraesuis subsp. diarizonae corrig. Le Minor et al. 1985, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43973= CCUG 30040 = CIP 82.31 = DSM 14847 = NCTC 10060.
Sequence accession no. (16S rRNA gene) for the type strain: EU014688.
Etymology: L. pref. di- (erroneously used in place of bis), two; N.L. gen. n. arizonae, the specific epithet of a species of the genus Salmonella; N.L. gen. n. diarizonae, the prefix di- underlines that this subspecies encompasses the diphasic serovars previously included in the species Salmonella arizonae ("subgenus III" of Kauffmann).
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Note: The original spelling, Salmonella cholerae-suis (sic) subsp. diarizonae, has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
→ ¤ Salmonella enterica subsp. diarizonae (Le Minor et al. 1985) Le Minor and Popoff 1987 comb. nov.
Salmonella choleraesuis subsp. houtenae corrig. Le Minor et al. 1985, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43974= CCUG 30041 = CIP 82.32 = DSM 9221 = NCTC 12418.
Sequence accession no. (16S rRNA gene) for the type strain: EU014684.
Synonyms: "Salmonella houten" Kauffmann 1962, "Salmonella houtenae" Le Minor et al. 1970.
Etymology: N.L. gen. n. houtenae, of Houten, a town in Holland.
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Note: The original spelling, Salmonella cholerae-suis (sic) subsp. houtenae, has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
→ ¤ Salmonella enterica subsp. houtenae (Le Minor et al. 1985) Le Minor and Popoff 1987 comb. nov.
Salmonella choleraesuis subsp. indica Le Minor et al. 1987, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) K1240 = ATCC 43976= CCUG 30038 = CIP 102501 = DSM 14848 = NCTC 12420.
Sequence accession no. (16S rRNA gene) for the type strain: EU014680.
Etymology: L. fem. adj. indica, of India, Indian.
Valid publication: Validation List no. 23. Int. J. Syst. Bacteriol., 1987, 37, 179-180.
Effective publication: LE MINOR (L.), POPOFF (M.Y.), LAURENT (B.) and HERMANT (D.): Individualisation d'une septième sous-espèce de Salmonella: S. choleraesuis subsp. indica subsp. nov. Ann. Inst. Pasteur, 1986, 137B, 211-217.
Validation List no. 23 in IJSEM Online
→ ¤ Salmonella enterica subsp. indica (Le Minor et al. 1987) Le Minor and Popoff 1987 comb. nov.
Salmonella choleraesuis subsp. salamae corrig. Le Minor et al. 1985, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43972= CCUG 30039 = CIP 8229 = DSM 9220 = NCTC 5773.
Sequence accession no. (16S rRNA gene) for the type strain: EU014685.
Synonym: "Salmonella salamae" Le Minor et al. 1970.
Etymology: N.L. gen. n. salamae, of (Dar Es-)Salaam, a Tanzanian city.
Valid publication: Validation List no. 18. Int. J. Syst. Bacteriol., 1985, 35, 375-376.
Effective publication: LE MINOR (L.), VÉRON (M.) and POPOFF (M.): Proposition pour une nomenclature des Salmonella. Ann. Microbiol., 1982, 133B, 245-254.
Validation List no. 18 in IJSEM Online
Note: The original spelling, Salmonella cholerae-suis (sic) subsp. salamae, has been corrected by Howey et al. 1990.
Reference: HOWEY (R.T.), LOCK (C.M.) and MOORE (L.V.H.): Subspecies names automatically created by Rule 46. Int. J. Syst. Bacteriol., 1990, 40, 317-319.
Original article in IJSEM Online
→ ¤ Salmonella enterica subsp. salamae (Le Minor et al. 1985) Le Minor and Popoff 1987 comb. nov.
Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, sp. nov., nom. rev. (Type species of the genus.)
Type strain: (see also Global Catalogue of Microorganisms) LT2 (serovar Typhimurium) = ATCC 43971= CCUG 42060 = CIP 60.62 = NBRC 13245 = NCIMB 11450 = NCTC 12416.
Sequence accession no. (16S rRNA gene) for the type strain: D12814, AE006468 (complete genome).
Heterotypic synonym: ¤ Salmonella choleraesuis corrig. (Smith 1894) Weldin 1927 (Approved Lists 1980).
Other synonym: "Salmonella enterica" Kauffmann and Edwards 1952.
Etymology: Gr. n. enteron, gut; L. suff. -icus -a -um, suffix used with the sense of belonging to; N.L. fem. adj. enterica, pertaining to the gut.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Notes:
1 From January 2005, Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 is the new type species of the genus Salmonella Lignieres 1900 (Approved Lists 1980).
References:
1 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
2 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
2 The epithet enterica in Salmonella enterica is conserved over all earlier epithets that may be applied to this species.
Reference: JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
Salmonella enterica subsp. arizonae (Borman 1957) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 13314= CCUG 6322 = CIP 82.30 = DSM 9386 = NCTC 8297.
Sequence accession no. (16S rRNA gene) for the type strain: AF008580.
Basonym: ¤ Salmonella arizonae (Borman 1957) Kauffmann 1964 (Approved Lists 1980).
Other homotypic synonym: ¤ Salmonella choleraesuis subsp. arizonae corrig. (Borman 1957) Le Minor et al. 1985.
Etymology: N.L. gen. n. arizonae, of Arizona, a state in the USA.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enterica subsp. bongori (Le Minor et al. 1985) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43975= CCUG 30042 = CIP 82.33 = DSM 13772 = NCTC 12419.
Sequence accession no. (16S rRNA gene) for the type strain: AF029227.
Basonym: ¤ Salmonella choleraesuis subsp. bongori corrig. Le Minor et al. 1985.
Etymology: N.L. gen. n. bongori, of Bongor, a town in Chad.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
→ ¤ Salmonella bongori (Le Minor et al. 1985) Reeves et al. 1989 comb. nov.
Salmonella enterica subsp. diarizonae (Le Minor et al. 1985) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43973= CCUG 30040 = CIP 82.31 = DSM 14847 = NCTC 10060.
Sequence accession no. (16S rRNA gene) for the type strain: EU014688.
Basonym: ¤ Salmonella choleraesuis subsp. diarizonae corrig. Le Minor et al. 1985.
Etymology: L. pref. di- (erroneously used in place of bis), two; N.L. gen. n. arizonae, the specific epithet of a species of the genus Salmonella; N.L. gen. n. diarizonae, the prefix di- underlines that this subspecies encompasses the diphasic serovars previously included in the species Salmonella arizonae ("subgenus III" of Kauffmann).
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, subsp. nov.
Type strain: (see also Global Catalogue of Microorganisms) LT2 (serovar Typhimurium) = ATCC 43971= CCUG 42060 = CIP 60.62 = NBRC 13245 = NCIMB 11450 = NCTC 12416.
Sequence accession no. (16S rRNA gene) for the type strain: D12814, AE006468 (complete genome).
Heterotypic Synonyms: ¤ Salmonella typhi (Schroeter 1886) Warren and Scott 1930 (Approved Lists 1980), ¤ Salmonella enteritidis (Gaertner 1888) Castellani and Chalmers 1919 (Approved Lists 1980), ¤ Salmonella typhimurium (Loeffler 1892) Castellani and Chalmers 1919 (Approved Lists 1980), ¤ Salmonella choleraesuis subsp. choleraesuis corrig. (Smith 1894) Le Minor et al. 1985, ¤ Salmonella paratyphi (ex Kayser 1902) Ezaki et al. 2000.
Etymology: Gr. n. enteron, gut; L. suff. -icus -a -um, suffix used with the sense of belonging to; N.L. fem. adj. enterica, pertaining to the gut.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enterica subsp. houtenae (Le Minor et al. 1985) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43974= CCUG 30041 = CIP 82.32 = DSM 9221 = NCTC 12418.
Sequence accession no. (16S rRNA gene) for the type strain: EU014684.
Basonym: ¤ Salmonella choleraesuis subsp. houtenae corrig. Le Minor et al. 1985.
Etymology: N.L. gen. n. houtenae, of Houten, a town in Holland.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enterica subsp. indica (Le Minor et al. 1987) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) K1240 = ATCC 43976= CCUG 30038 = CIP 102501 = DSM 14848 = NCTC 12420.
Sequence accession no. (16S rRNA gene) for the type strain: EU014680.
Basonym: ¤ Salmonella choleraesuis subsp. indica Le Minor et al. 1987.
Etymology: L. fem. adj. indica, of India, Indian.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enterica subsp. salamae (Le Minor et al. 1985) Le Minor and Popoff 1987, comb. nov.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 43972= CCUG 30039 = CIP 8229 = DSM 9220 = NCTC 5773.
Sequence accession no. (16S rRNA gene) for the type strain: EU014685.
Basonym: ¤ Salmonella choleraesuis subsp. salamae corrig. Le Minor et al. 1985.
Etymology: N.L. gen. n. salamae, of (Dar Es-)Salaam, a Tanzanian city.
References:
1 LE MINOR (L.) and POPOFF (M.Y.): Request for an Opinion. Designation of Salmonella enterica sp. nov., nom. rev., as the type and only species of the genus Salmonella. Int. J. Syst. Bacteriol., 1987, 37, 465-468.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: The type species of the genus Salmonella Lignieres 1900 is Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987, with the type strain LT2T, and conservation of the epithet enterica in Salmonella enterica over all earlier epithets that may be applied to this species. Opinion 80. Int. J. Syst. Evol. Microbiol., 2005, 55, 519-520.
Opinion 80 in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella enteritidis (Gaertner 1888) Castellani and Chalmers 1919, species.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 13076= NCTC 12694.
Sequence accession no. (16S rRNA gene) for the type strain: EU014687.
Synonym: "Bacillus enteritidis" Gaertner 1888.
Etymology: Gr. n. enteron, gut; N.L. n. enteris -idis, an inflammation of the gut, enteritis; N.L. gen. n. enteritidis, of an enteritis.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: 1 GAERTNER (E.): Über die Fleischuergiftung in Frankenhausen a. Kyffh. und der Erreger derselben. Korrespondenzblatt des Allgemeinen arztilchen Vereins von Thuringen, 1888, 17, 573-600. 2 CASTELLANI (A.) and CHALMERS (A.J.): Manual of Tropical Medicine, 3rd ed., Williams Wood and Co., New York, 1919, p. 939.
Note: The Request for an Opinion by Ezaki et al. about the conservation of Salmonella enteritidis (Int. J. Syst. Evol. Microbiol., 2000, 50, 945-947) was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
→ ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella enteritidis (Gaertner 1888) Castellani and Chalmers 1919 (Approved Lists 1980) is a heterotypic synonym of ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella paratyphi (ex Kayser 1902) Ezaki et al. 2000, sp. nov., nom. rev.
Type strain: (see also Global Catalogue of Microorganisms) NCTC 5702 = KI 1015.
Sequence accession no. (16S rRNA gene) for the type strain: not found.
Synonyms: "Bacterium paratyphi" Kaiser 1902, "Bacterium paratyphi typhus A" Brion and Kaiser 1902, "Salmonella paratyphi" (Kaiser 1902) Castellani and Chalmers 1919, "Salmonella paratyphi-A" (Brion and Kaiser 1902) Castellani and Chalmers 1919.
Etymology: Gr. prep. para, beside, alongside, Gr. n. tuphos, fever accompanied by stuport; N.L. gen. n. paratyphi, of a typhoid-like infection.
Valid publication: EZAKI (T.), AMANO (M.), KAWAMURA (Y.) and YABUUCHI (E.): Proposal of Salmonella paratyphi sp. nov., nom. rev. and Request for an Opinion to conserve the specific epithet paratyphi in the binary combination Salmonella paratyphi as nomen epitheton conservandum. Int. J. Syst. Evol. Microbiol., 2000, 50, 941-944.
Original article in IJSEM Online
Notes:
1 Ezaki et al. 2000 proposed the new species Salmonella paratyphi by raising Salmonella choleraesuis subsp. choleraesuis serovar Paratyphi A to species satus.
2 The name Salmonella paratyphi (ex Kayser 1902) Ezaki et al. 2000 was not included in the "Notification that new names and new combinations have appeared in volume 50, part 2, of the IJSEM" [1]. So, according to the minutes of the meeting of the Judicial Commission (14 September 1990, Osaka, Japan) [2], Salmonella paratyphi is not validly published. However, in the opinion of the author of "List of Prokaryotic names with Standing in Nomenclature" the name Salmonella paratyphi has standing in nomenclature. Moreover, Salmonella paratyphi is listed in the paper by Tindall et al. 2005.
References:
1 ASSOCIATE EDITOR, IJSEM: Notification that new names and new combinations have appeared in volume 50, part 2, of the IJSEM. Int. J. Syst. Evol. Microbiol., 2000, 50, 951-953.
Notification List in IJSEM Online
2 JUDICIAL COMMISSION: Minutes of the meeting, 14 September 1990, Osaka, Japan. Int. J. Syst. Bacteriol., 1991, 41, 185-187.
Original article in IJSEM Online
3 TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
3 The Request for an Opinion by Ezaki et al. about the conservation of the name Salmonella paratyphi (Int. J. Syst. Evol. Microbiol., 2000, 50, 941-944) was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
→ ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella paratyphi (ex Kayser 1902) Ezaki et al. 2000 is a heterotypic synonym of ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella subterranea Shelobolina et al. 2005, sp. nov.
Type strain: (see also Global Catalogue of Microorganisms) FRCl = ATCC BAA-836 = DSM 16208.
Sequence accession no. (16S rRNA gene) for the type strain: AY373829.
Etymology: L. fem. adj. subterranea, underground, subterranean.
Valid publication: Validation List no. 102. Int. J. Syst. Evol. Microbiol., 2005, 55, 547-549.
Effective publication: SHELOBOLINA (E.S.), SULLIVAN (S.A.), O'NEILL (K.R.), NEVIN (K.P.) and LOVLEY (D.R.): Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant bacterium from low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp. nov. Appl. Environ. Microbiol., 2004, 70, 2959-2965.
Validation List no. 102 in IJSEM Online - Effective publication Online
Note: According to E.S. Shelobolina, the strain FRCl = ATCC BAA-836 = DSM 16208 is closely related to Escherichia hermannii and does not belong to the genus Salmonella.
Reference: SHELOBOLINA (E.S.): Personal communication (June 05, 2010).
Salmonella typhi (Schroeter 1886) Warren and Scott 1930, species.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 19430= CUETM 79.394 = HAMBI 1306 = NCTC 8385.
Sequence accession no. (16S rRNA gene) for the type strain: Z47544.
Synonyms: "Bacillus typhi" Schroeter 1886, "Bacterium (subgen. Eberthella) typhi" (Schroeter 1886) Buchanan 1918.
Etymology: Gr. n. tuphos, a fever accompanied by stuport; N.L. gen. n. typhi, of typhoid.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: 1 SCHROETER (J.). In: F. COHN (ed.), Kryptogamenflora von Schlesien. Band 3, Heft 3, Pilze. J.U. Kern's Verlag, Breslau, 1885-1889, pp. 1-814. 2 WARREN (S.H.) and SCOTT (W.M.): A new serological type of Salmonella. Journal of Hygiene, 1930, 29, 415-417.
Note: The Requests for an Opinion by Euzéby et al. (Int. J. Syst. Bacteriol., 1999, 49, 927-930), and by Ezaki et al. (Int. J. Syst. Evol. Microbiol., 2000, 50, 945-947) about the conservation of Salmonella typhi was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
Original article by Euzéby 1999 in IJSEM Online
→ ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella typhi (Schroeter 1886) Warren and Scott 1930 (Approved Lists 1980) is a heterotypic synonym of ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online
Salmonella typhimurium (Loeffler 1892) Castellani and Chalmers 1919, species.
Type strain: (see also Global Catalogue of Microorganisms) ATCC 13311= CIP 58.58 = JCM 1652 = NCTC 74.
Sequence accession no. (16S rRNA gene) for the type strain: EU014686.
Synonyms: "Bacillus typhimurium" Loeffler 1892, "Salmonella typhi-murium" (sic) (Loeffler 1892) Castellani and Chalmers 1919.
Etymology: Gr. n. tuphos, a fever accompanied by stuport; L. gen. pl. n. murium, of mice; N.L. gen. pl. n. typhimurium, of typhoid of mice.
Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) (editors): Approved Lists of Bacterial Names. Int. J. Syst. Bacteriol., 1980, 30, 225-420 (Approved Lists of Bacterial Names in IJSEM Online - Approved Lists of Bacterial Names Amended edition).
Original publication: 1 LOEFFLER (F.): Über Epidemieen unter den im hygienischen Institut zu Greifswald gehaltenen Mäusen und über die Bekämpfung der Feldmausplage. Zentralblatt fur Bakteriologie Parasitenkunde Infektionskrankheiten und Hygiene. Abteilung I, 1892, 11, 129-141. 2 CASTELLANI (A.) and CHALMERS (A.J.): Manual of Tropical Medicine, 3rd ed., Williams Wood and Co., New York, 1919, p. 939.
Note: The Request for an Opinion by Ezaki et al. about the conservation of Salmonella typhimurium (Int. J. Syst. Evol. Microbiol., 2000, 50, 945-947) was not granted by the Judicial Commission. See the file ¤ "Requests for Opinions and Judicial Opinions".
→ ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Note: According to Tindall et al. 2005, Salmonella typhimurium (Loeffler 1892) Castellani and Chalmers 1919 (Approved Lists 1980) is a heterotypic synonym of ¤ Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987.
Reference: TINDALL (B.J.), GRIMONT (P.A.D.), GARRITY (G.M.) and EUZÉBY (J.P.): Nomenclature and taxonomy of the genus Salmonella. Int. J. Syst. Evol. Microbiol., 2005, 55, 521-524.
Original article by Tindall et al. in IJSEM Online